| Pl. | Verein | Sp. | ss-u-n | U | N | Tore | Diff. | Punkte | ||
|---|---|---|---|---|---|---|---|---|---|---|
| 1 |
 |
Köln (A) 1. FC Köln (A) | 33 | 19-5-9 19 | 5 | 9 | 83:46 | 37 | 62 | |
| 2 |
 |
Paderborn (N) SC Paderborn 07 (N) | 33 | 16-9-8 16 | 9 | 8 | 75:47 | 28 | 57 | |
| 3 |
 |
Union 1. FC Union Berlin | 33 | 14-14-5 14 | 14 | 5 | 52:31 | 21 | 56 | |
| 4 |
 |
HSV (A) Hamburger SV (A) | 33 | 15-8-10 15 | 8 | 10 | 42:42 | 0 | 53 | |
| 5 |
 |
Heidenheim 1. FC Heidenheim | 33 | 14-10-9 14 | 10 | 9 | 51:43 | 8 | 52 | |
| 6 |
 |
Kiel Holstein Kiel | 33 | 13-10-10 13 | 10 | 10 | 60:50 | 10 | 49 | |
| 7 |
 |
St. Pauli FC St. Pauli | 33 | 14-7-12 14 | 7 | 12 | 45:51 | -6 | 49 | |
| 8 |
 |
Regensburg Jahn Regensburg | 33 | 12-12-9 12 | 12 | 9 | 53:52 | 1 | 48 | |
| 9 |
 |
Bielefeld Arminia Bielefeld | 33 | 12-10-11 12 | 10 | 11 | 51:50 | 1 | 46 | |
| 10 |
 |
Bochum VfL Bochum | 33 | 11-10-12 11 | 10 | 12 | 47:48 | -1 | 43 | |
| 11 |
 |
Darmstadt SV Darmstadt 98 | 33 | 12-7-14 12 | 7 | 14 | 44:53 | -9 | 43 | |
| 12 |
 |
Aue Erzgebirge Aue | 33 | 11-7-15 11 | 7 | 15 | 43:46 | -3 | 40 | |
| 13 |
 |
Dresden Dynamo Dresden | 33 | 10-9-14 10 | 9 | 14 | 38:47 | -9 | 39 | |
| 14 |
 |
Fürth SpVgg Greuther Fürth | 33 | 9-12-12 9 | 12 | 12 | 35:55 | -20 | 39 | |
| 15 |
 |
Sandhausen SV Sandhausen | 33 | 9-10-14 9 | 10 | 14 | 43:50 | -7 | 37 | |
| 16 |
 |
Ingolstadt FC Ingolstadt 04 | 33 | 9-8-16 9 | 8 | 16 | 41:51 | -10 | 35 | |
| 17 |
 |
Magdeburg (N) 1. FC Magdeburg (N) | 33 | 6-12-15 6 | 12 | 15 | 34:52 | -18 | 30 | |
| 18 |
 |
Duisburg MSV Duisburg | 33 | 6-10-17 6 | 10 | 17 | 39:62 | -23 | 28 |