| Pl. | Team | Sp. | ss-u-n | U | N | Tore | Diff. | Punkte | ||
|---|---|---|---|---|---|---|---|---|---|---|
| 1 |
 |
Frankfurt (A) Eintracht Frankfurt (A) | 32 | 20-8-4 20 | 8 | 4 | 76:30 | 46 | 68 | |
| 2 |
 |
Fürth SpVgg Greuther Fürth | 32 | 20-8-4 20 | 8 | 4 | 70:24 | 46 | 68 | |
| 3 |
 |
Düsseldorf Fortuna Düsseldorf | 32 | 16-12-4 16 | 12 | 4 | 61:32 | 29 | 60 | |
| 4 |
 |
St. Pauli (A) FC St. Pauli (A) | 32 | 17-8-7 17 | 8 | 7 | 54:33 | 21 | 59 | |
| 5 |
 |
Paderborn SC Paderborn 07 | 32 | 16-10-6 16 | 10 | 6 | 50:37 | 13 | 58 | |
| 6 |
 |
1860 München TSV 1860 München | 32 | 16-6-10 16 | 6 | 10 | 59:44 | 15 | 54 | |
| 7 |
 |
Union 1. FC Union Berlin | 32 | 13-6-13 13 | 6 | 13 | 49:52 | -3 | 45 | |
| 8 |
 |
Braunschweig (N) Eintracht Braunschweig (N) | 32 | 9-15-8 9 | 15 | 8 | 34:32 | 2 | 42 | |
| 9 |
 |
Dresden (N) Dynamo Dresden (N) | 32 | 11-8-13 11 | 8 | 13 | 48:51 | -3 | 41 | |
| 10 |
 |
Duisburg MSV Duisburg | 32 | 9-8-15 9 | 8 | 15 | 38:44 | -6 | 35 | |
| 11 |
 |
Ingolstadt FC Ingolstadt 04 | 32 | 7-13-12 7 | 13 | 12 | 41:55 | -14 | 34 | |
| 12 |
 |
FSV Frankfurt FSV Frankfurt | 32 | 7-13-12 7 | 13 | 12 | 42:57 | -15 | 34 | |
| 13 |
 |
Bochum VfL Bochum | 32 | 9-7-16 9 | 7 | 16 | 38:53 | -15 | 34 | |
| 14 |
 |
Cottbus Energie Cottbus | 32 | 7-11-14 7 | 11 | 14 | 28:47 | -19 | 32 | |
| 15 |
 |
Aue Erzgebirge Aue | 32 | 7-11-14 7 | 11 | 14 | 28:52 | -24 | 32 | |
| 16 |
 |
Karlsruhe Karlsruher SC | 32 | 8-6-18 8 | 6 | 18 | 33:59 | -26 | 30 | |
| 17 |
 |
Rostock (N) Hansa Rostock (N) | 32 | 5-11-16 5 | 11 | 16 | 28:56 | -28 | 26 | |
| 18 |
 |
Aachen Alemannia Aachen | 32 | 4-13-15 4 | 13 | 15 | 27:46 | -19 | 25 |